University of Oxford OMNI Oxford Machine
Learning in
NeuroImaging Lab
Research theme

From scan to outcome: brain growth and neurodevelopment

From routine scans to insight about each pregnancy: how the brain grows, and what that means for development after birth.

Research / From scan to outcome

The problem

A single measurement means little on its own. To spot a brain that is developing differently, we need to know how healthy brains grow across gestation, and to understand how prenatal brain development relates to neurodevelopment after birth.

Our approach

  1. MeasureExtract brain structure volumes and maturation features from each scan.
  2. Model growthNormative growth trajectories by gestational age, from large international cohorts.
  3. Link to outcomesRelate prenatal brain features to neurodevelopment at 2 years.
  4. EvaluateWork with clinical partners to assess the measures on clinical data.
  1. Impaired fetal brain growth and neurodevelopmental deficits at 2 years: deep phenotyping of maternal–fetal pathophysiology Villar J, Carvalho M, Gunier R, McGready R, Valdespino Y, Lagerborg KA, Barros FC, Conde-Agudelo A, et al. · The Lancet Obstetrics, Gynaecology, & Women's Health · 2026
  2. Clinical Grading of Artificial Intelligence‐Based 3D Fetal Brain Segmentations: A Cross‐Vendor Evaluation of Deep Learning in Fetal Neuroimaging Aliasi M, Hesse LS, Wyburd MK, Snoep MC, Smit RM, Namburete AIL, Haak MC · Prenatal Diagnosis · 2026
  3. Normative growth trajectories of fetal brain regions validated by satisfactory maturation of neurodevelopmental domains at 2 years of age Wyburd MK, Kennedy SH, Fernandes M, Dinsdale NK, Hesse LS, Gunier RB, Ismail LC, Ohuma EO, et al. · Nature Communications · 2026
  4. Deep learning assessment of fetal brain maturation on 3D ultrasound volumes in early‐onset fetal growth restriction Meijerink L, Wyburd M, Namburete AIL, Alderliesten T, Groenendaal F, Benders M, Terstappen F, Bekker MN · Ultrasound in Obstetrics & Gynecology · 2026
  5. Semi-supervised 3D Medical Segmentation from 2D Natural Images Pretrained Model Yeung P, Ramesh J, Lyu P, Namburete A, Rajapakse J · Lecture Notes in Computer Science · 2026
  6. Cross‐Modality Comparison of Fetal Brain Phenotypes: Insights From Short‐Interval Second‐Trimester MRI and Ultrasound Imaging Wyburd MK, Dinsdale NK, Kyriakopoulou V, Venturini L, Wright R, Uus A, Matthew J, Skelton E, et al. · Human Brain Mapping · 2025
  7. Exploring Test Time Adaptation for Subcortical Segmentation of the Fetal Brain in 3D Ultrasound Omolegan J, Yeung PH, Wyburd MK, Hesse L, Haak M, Namburete AIL, Dinsdale NK · 2025 IEEE 22nd International Symposium on Biomedical Imaging (ISBI) · 2025
  8. Anatomically plausible segmentations: Explicitly preserving topology through prior deformations Wyburd MK, Dinsdale NK, Jenkinson M, Namburete AI · Medical Image Analysis · 2024
  9. Is Your Style Transfer Doing Anything Useful? An Investigation Into Hippocampus Segmentation and the Role of Preprocessing Kalabizadeh H, Griffanti L, Yeung PH, Voets N, Gillis G, Mackay CE, Namburete AI, Dinsdale NK, et al. · openRxiv · 2024
  10. Normative spatiotemporal fetal brain maturation with satisfactory development at 2 years Namburete AIL, Papież BW, Fernandes M, Wyburd MK, Hesse LS, Moser FA, Ismail LC, Gunier RB, et al. · Nature · 2023
  11. Brain Ages Derived from Different MRI Modalities are Associated with Distinct Biological Phenotypes Roibu A, Adaszewski S, Schindler T, Smith SM, Namburete AI, Lange FJ · 2023 10th IEEE Swiss Conference on Data Science (SDS) · 2023
  12. Prototype Learning for Explainable Brain Age Prediction Hesse LS, Dinsdale NK, Namburete AIL · arXiv · Jan 2023
  13. BEAN: Brain Extraction and Alignment Network for 3D Fetal Neurosonography Moser F, Huang R, Papież BW, Namburete AI · NeuroImage · 2022
  14. Subcortical segmentation of the fetal brain in 3D ultrasound using deep learning Hesse LS, Aliasi M, Moser F, Haak MC, Xie W, Jenkinson M, Namburete AI · NeuroImage · 2022
  15. Learning patterns of the ageing brain in MRI using deep convolutional networks Dinsdale NK, Bluemke E, Smith SM, Arya Z, Vidaurre D, Jenkinson M, Namburete AI · NeuroImage · 2021
  16. Assessment of Regional Cortical Development Through Fissure Based Gestational Age Estimation in 3D Fetal Ultrasound Wyburd MK, Hesse LS, Aliasi M, Jenkinson M, Papageorghiou AT, Haak MC, Namburete AIL · Lecture Notes in Computer Science · 2021
  17. Improving U-Net Segmentation with Active Contour Based Label Correction Hesse LS, Namburete AIL · Communications in Computer and Information Science · 2020
  18. Multi-task CNN for Structural Semantic Segmentation in 3D Fetal Brain Ultrasound Venturini L, Papageorghiou AT, Noble JA, Namburete AIL · Communications in Computer and Information Science · 2020
  19. Cortical Plate Segmentation Using CNNs in 3D Fetal Ultrasound Wyburd MK, Jenkinson M, Namburete AIL · Communications in Computer and Information Science · 2020
  20. Fully-automated alignment of 3D fetal brain ultrasound to a canonical reference space using multi-task learning Namburete AI, Xie W, Yaqub M, Zisserman A, Noble JA · Medical Image Analysis · 2018
  21. Learning-based prediction of gestational age from ultrasound images of the fetal brain Namburete AI, Stebbing RV, Kemp B, Yaqub M, Papageorghiou AT, Noble JA · Medical Image Analysis · 2015